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Advancements in Medical Language Models with UltraMedical Datasets

UltraMedical collections improve medical language models and address data shortages.

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In recent years, large language models (LLMs) have shown impressive skills across many fields, including biomedicine. These models, such as GPT-4 and Gemini, have been able to perform well in specialized medical areas. However, along with these advancements come concerns about privacy and security related to sensitive patient data. This article discusses the development of the UltraMedical Datasets that aim to build better models for medical use.

The Need for Specialized Models

General-purpose LLMs have a wide range of applications, but they may not be as effective in specialized fields like medicine. To create models that can perform better in healthcare, it is crucial to have high-quality datasets. Typically, models are fine-tuned using data that is specially curated and enhanced through various techniques.

One of the challenges is that these Fine-tuning techniques, like supervised fine-tuning and reinforcement learning, require a lot of specialized data, which is often not available in open-source communities. This shortage makes it difficult for open-source models to keep up with proprietary models like GPT-4.

Introducing UltraMedical Collections

To address these challenges, we introduce the UltraMedical collections, which consist of comprehensive datasets designed specifically for biomedicine. These collections include about 410,000 medical instructions, both manual and synthetic, that cover various medical questions and tasks.

The datasets contain instructions that require complex reasoning. To create these datasets, we have used a mix of information from various sources. The goal is to provide high-quality annotations, which can improve the performance of medical models.

Building the Dataset

Instruction Composition

UltraMedical datasets are built on a diverse range of medical instruction types. These types include multiple-choice questions, open-ended questions related to clinical scenarios, and research-oriented prompts. This variety helps ensure that the datasets address different aspects of medical knowledge.

We gathered questions from many sources, including medical exams and literature. This mixture of data helps maintain a principle of diversity in the UltraMedical collections.

Complexity of Instructions

In addition to diversity, complexity is also an important characteristic of the UltraMedical collections. Complex questions not only require knowledge but also critical thinking skills. To ensure that the instructions are complex enough, we use methods to filter and evaluate the instructions based on criteria that measure their difficulty.

We employed a scoring system to evaluate each instruction's complexity level. Instructions that were too simple were removed, focusing on those that would challenge models effectively.

Data Annotation and Preferences

After compiling the instructions, we needed to annotate them with answers. This is where models like GPT-4 come in handy. We used this powerful model to generate responses for each instruction, offering a high-quality answer to enhance the Training data.

For the preference data, we sampled responses from various models, both proprietary and open-source. These responses underwent ranking and evaluation to identify which answers were preferred based on quality, clarity, and correctness.

Creating the Medical Reward Bench

The Medical Reward Bench is a tool we developed to evaluate how well our models perform. It consists of several examples categorized based on their complexity and difficulty. Using this bench, we can assess the effectiveness of our preference annotations.

Each example in the Reward Bench was reviewed by human experts to ensure accuracy, which helps make sure our evaluation is reliable.

Training and Fine-Tuning Models

Once the UltraMedical datasets were created, we moved on to training the models. The Llama-3 series of models was used as the base for our fine-tuning efforts. We trained these models on the UltraMedical datasets using supervised fine-tuning techniques.

Supervised Fine-Tuning

Supervised fine-tuning involves adjusting the model's parameters based on specific tasks. In our case, we used the UltraMedical instructions to prepare the models for medical question-answering tasks. Through this process, the models learn to provide more accurate and relevant answers.

We combined the medical data with data from general domains to ensure that the model maintains a balance between specialized medical knowledge and general understanding.

Preference Learning

After the initial fine-tuning, we explored preference learning techniques. This process allows the models to better align with user preferences by learning from the data that has been previously annotated. By optimizing based on user feedback, we hope to create models that can offer more satisfactory responses to users in medical contexts.

Performance Evaluation

To evaluate the performance of our UltraMedical models, we benchmarked them against various well-known medical question-answering tasks. The models underwent tests on datasets like MedQA and PubMedQA to assess their accuracy and efficiency in answering medical queries.

Through these evaluations, we found that the UltraMedical models outperform many existing models in medical benchmarks. This success highlights the effectiveness of our specialized datasets and fine-tuning processes.

Addressing Challenges in Open-Source Models

While proprietary models have gained advantages due to their access to extensive datasets and resources, open-source models often struggle. The UltraMedical approach aims to change that by providing open-source models access to high-quality datasets that can enhance their performance.

Customization and Adaptability

One of the benefits of open-source models is their flexibility. These models can be further customized to meet specific needs and contexts. By using local datasets, open-source models can adapt to unique patient populations and healthcare settings, improving their practical usage in real-world applications.

Future Directions

Our work on the UltraMedical project is far from complete. While we have made significant strides in developing these datasets and training models, there are still many areas for improvement. For instance, we can enhance the quality of the datasets by collecting more diverse instructions and refining the annotation processes.

Advanced Reward Models

Another potential area for future research lies in developing more advanced reward models. These models can help guide the training of our language models more effectively. The goal is to create models that can not only perform well in medical tasks but also adapt continuously through iterative learning processes.

Conclusion

In summary, the UltraMedical collections represent an important step toward improving the capabilities of language models in the biomedical field. By providing high-quality datasets and leveraging advanced training techniques, we hope to create models that can serve as effective tools for medical professionals.

The journey to build better specialized models continues, but with the UltraMedical approach, we are making significant progress toward achieving our goals. The improvements in performance show the promise of using data-driven strategies to enhance the abilities of open-source models, benefitting the wider medical community.

Original Source

Title: UltraMedical: Building Specialized Generalists in Biomedicine

Abstract: Large Language Models (LLMs) have demonstrated remarkable capabilities across various domains and are moving towards more specialized areas. Recent advanced proprietary models such as GPT-4 and Gemini have achieved significant advancements in biomedicine, which have also raised privacy and security challenges. The construction of specialized generalists hinges largely on high-quality datasets, enhanced by techniques like supervised fine-tuning and reinforcement learning from human or AI feedback, and direct preference optimization. However, these leading technologies (e.g., preference learning) are still significantly limited in the open source community due to the scarcity of specialized data. In this paper, we present the UltraMedical collections, which consist of high-quality manual and synthetic datasets in the biomedicine domain, featuring preference annotations across multiple advanced LLMs. By utilizing these datasets, we fine-tune a suite of specialized medical models based on Llama-3 series, demonstrating breathtaking capabilities across various medical benchmarks. Moreover, we develop powerful reward models skilled in biomedical and general reward benchmark, enhancing further online preference learning within the biomedical LLM community. Datasets and models are available at https://github.com/TsinghuaC3I/UltraMedical

Authors: Kaiyan Zhang, Sihang Zeng, Ermo Hua, Ning Ding, Zhang-Ren Chen, Zhiyuan Ma, Haoxin Li, Ganqu Cui, Biqing Qi, Xuekai Zhu, Xingtai Lv, Hu Jinfang, Zhiyuan Liu, Bowen Zhou

Last Update: 2024-10-29 00:00:00

Language: English

Source URL: https://arxiv.org/abs/2406.03949

Source PDF: https://arxiv.org/pdf/2406.03949

Licence: https://creativecommons.org/licenses/by/4.0/

Changes: This summary was created with assistance from AI and may have inaccuracies. For accurate information, please refer to the original source documents linked here.

Thank you to arxiv for use of its open access interoperability.

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