Introducing IGL-Bench: A New Standard for Imbalanced Graph Learning
IGL-Bench provides essential tools for better analyzing imbalanced graphs.
― 6 min read
Table of Contents
- The Problem of Imbalance in Graphs
- Understanding IGL
- The Need for a Benchmark in IGL
- The New Benchmark: IGL-Bench
- Datasets Included in IGL-Bench
- Algorithms Integrated into IGL-Bench
- Objectives of IGL-Bench
- The Structure of IGL-Bench
- Evaluation Metrics
- Key Research Questions Addressed by IGL-Bench
- Results and Findings
- Performance of Node-Level Class-Imbalanced Algorithms
- Performance of Graph-Level Class-Imbalanced Algorithms
- Robustness Analysis of Algorithms
- Open Source Package for Reproducibility
- Conclusion
- Original Source
- Reference Links
Graphs are useful structures for representing relationships in various fields, including social networks, communication systems, and recommendation systems. In many cases, these graphs are not perfectly balanced, meaning some parts have a lot of data while others are lacking. This imbalance can harm the performance of Algorithms that analyze these graphs. Imbalanced Graph Learning (IGL) is a growing field that focuses on addressing these issues.
The Problem of Imbalance in Graphs
In an imbalanced graph, some classes or groups have a significant number of representatives, while others have very few. This can lead to algorithms that are more oriented toward the larger groups, neglecting those with fewer samples. For example, in a social network, you may have many users from a popular group and only a few from a less popular group. When you try to predict or classify something about users, the model may largely ignore the less popular group.
Understanding IGL
IGL aims to improve how algorithms learn from imbalanced data in graphs. It works by providing strategies that ensure better learning even when some classes have much less data. This can lead to more accurate predictions and classifications, even in situations where data is not evenly distributed. Methods in IGL focus on adjusting the learning process to ensure that all classes are treated fairly.
The Need for a Benchmark in IGL
For IGL to advance, there needs to be a reliable way to test and compare various algorithms. This is where a comprehensive benchmark comes in. A benchmark provides a framework for examining how different algorithms perform when dealing with imbalanced graphs. It helps researchers understand which methods work best and in which situations.
The New Benchmark: IGL-Bench
The development of IGL-Bench marks a significant step toward a solid foundation for evaluating IGL algorithms. It includes several Datasets and a variety of algorithms, allowing for a wide-ranging comparison. This benchmark is designed to address both Class Imbalance, where some classes have many more samples than others, and topology imbalance, which refers to the uneven structure of graphs.
Datasets Included in IGL-Bench
IGL-Bench features 16 diverse datasets that represent various domains. These datasets are used to evaluate the performance of IGL algorithms effectively. They include citation networks, social networks, and biological data, each with its unique characteristics.
Algorithms Integrated into IGL-Bench
The benchmark incorporates 24 state-of-the-art algorithms designed to handle various aspects of imbalanced learning. They are categorized based on whether they address class imbalance, topology imbalance, or both. This classification allows for a more organized assessment of how each algorithm performs in different scenarios.
Objectives of IGL-Bench
IGL-Bench aims to achieve several key goals:
Comprehensive Evaluation: It allows for a fair comparison among various algorithms by standardizing data processing steps and evaluation criteria.
Insightful Analysis: Through systematic testing, the benchmark helps reveal the strengths and weaknesses of different algorithms.
Open Access: By providing an open-sourced package, IGL-Bench encourages wider use and further research within the field.
The Structure of IGL-Bench
IGL-Bench is organized into several modules:
Imbalance Manipulator: This module allows users to manipulate datasets to create various levels of imbalance, enabling testing across different scenarios.
IGL Algorithms Module: It contains built-in state-of-the-art algorithms and also allows for the integration of user-defined algorithms.
GNN Backbones: This part supports a variety of mainstream Graph Neural Networks (GNNs) that can be used in IGL tasks.
Package Utils: It includes utility tools designed to enhance usability and benchmarking efficiency within the package.
Evaluation Metrics
To assess the performance of algorithms, IGL-Bench uses several evaluation metrics that offer insights into how well IGL methods work under different circumstances. Some of the key metrics are:
Accuracy: This metric measures how often the algorithm makes correct predictions. However, it may not provide a complete picture in imbalanced situations.
Balanced Accuracy: This adjusts the standard accuracy to account for different class sizes, giving a more equitable view of performance.
Macro-F1 Score: This score considers both precision and recall across all classes, highlighting the performance of the algorithm on minority classes.
AUC-ROC Score: This metric evaluates performance across all classification thresholds, offering a comprehensive view of how well an algorithm can distinguish between classes.
Key Research Questions Addressed by IGL-Bench
IGL-Bench is designed to tackle important research questions, including:
What progress has been made by the current algorithms? It aims to compare the effectiveness of different IGL methods, providing insights for future improvements.
How well do these algorithms handle varying levels of imbalance? This involves studying how algorithms perform as the degree of imbalance changes.
Do the algorithms create clearer boundaries between classes? This question seeks to determine whether the use of IGL methods helps sharpen distinctions between different classes.
How efficient are the algorithms in terms of time and resources? Efficiency is crucial for real-world applications, and this question looks into how well algorithms perform while managing computational costs.
Results and Findings
The findings from the benchmark provide valuable information about the strengths and weaknesses of different IGL algorithms across various datasets and conditions.
Performance of Node-Level Class-Imbalanced Algorithms
The evaluation demonstrates that many algorithms outperform traditional methods on a variety of datasets, showing improvements in accuracy, balanced accuracy, and F1 scores.
Performance of Graph-Level Class-Imbalanced Algorithms
Similar trends are noted in the performance of graph-level algorithms. These methods often show robust performance, highlighting their effectiveness even under challenging conditions.
Robustness Analysis of Algorithms
The robustness of algorithms under different levels of imbalance is a key area of focus. The results indicate varying degrees of stability, with some algorithms handling extreme imbalances more gracefully than others.
Open Source Package for Reproducibility
An important aspect of IGL-Bench is its open-source nature. This allows anyone to utilize the benchmark for their research, facilitating reproducibility and fostering new advancements in the field.
Conclusion
The introduction of IGL-Bench significantly advances the field of Imbalanced Graph Learning by providing a solid benchmark for evaluating algorithms. By offering a comprehensive suite of datasets, algorithms, and evaluation metrics, it sets the stage for future research to build upon. As researchers continue to explore the complexities of graph data, IGL-Bench will undoubtedly play a crucial role in enhancing our understanding and improving methods for dealing with imbalance in graph learning.
Title: IGL-Bench: Establishing the Comprehensive Benchmark for Imbalanced Graph Learning
Abstract: Deep graph learning has gained grand popularity over the past years due to its versatility and success in representing graph data across a wide range of domains. However, the pervasive issue of imbalanced graph data distributions, where certain parts exhibit disproportionally abundant data while others remain sparse, undermines the efficacy of conventional graph learning algorithms, leading to biased outcomes. To address this challenge, Imbalanced Graph Learning (IGL) has garnered substantial attention, enabling more balanced data distributions and better task performance. Despite the proliferation of IGL algorithms, the absence of consistent experimental protocols and fair performance comparisons pose a significant barrier to comprehending advancements in this field. To bridge this gap, we introduce IGL-Bench, a foundational comprehensive benchmark for imbalanced graph learning, embarking on 16 diverse graph datasets and 24 distinct IGL algorithms with uniform data processing and splitting strategies. Specifically, IGL-Bench systematically investigates state-of-the-art IGL algorithms in terms of effectiveness, robustness, and efficiency on node-level and graph-level tasks, with the scope of class-imbalance and topology-imbalance. Extensive experiments demonstrate the potential benefits of IGL algorithms on various imbalanced conditions, offering insights and opportunities in the IGL field. Further, we have developed an open-sourced and unified package to facilitate reproducible evaluation and inspire further innovative research, which is available at https://github.com/RingBDStack/IGL-Bench.
Authors: Jiawen Qin, Haonan Yuan, Qingyun Sun, Lyujin Xu, Jiaqi Yuan, Pengfeng Huang, Zhaonan Wang, Xingcheng Fu, Hao Peng, Jianxin Li, Philip S. Yu
Last Update: 2024-06-19 00:00:00
Language: English
Source URL: https://arxiv.org/abs/2406.09870
Source PDF: https://arxiv.org/pdf/2406.09870
Licence: https://creativecommons.org/licenses/by/4.0/
Changes: This summary was created with assistance from AI and may have inaccuracies. For accurate information, please refer to the original source documents linked here.
Thank you to arxiv for use of its open access interoperability.
Reference Links
- https://github.com/RingBDStack/IGL-Bench
- https://wandb.ai/
- https://github.com/codeshareabc/DRGCN
- https://github.com/YuWVandy/DPGNN
- https://github.com/Leo-Q-316/ImGAGN
- https://github.com/TianxiangZhao/GraphSmote
- https://github.com/JoonHyung-Park/GraphENS
- https://github.com/LirongWu/GraphMixup
- https://github.com/SukwonYun/LTE4G
- https://github.com/Jaeyun-Song/TAM
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- https://github.com/jiank2/RawlsGCN
- https://github.com/jumxglhf/GraphPatcher
- https://github.com/victorchen96/ReNode
- https://github.com/RingBDStack/PASTEL
- https://github.com/RingBDStack/HyperIMBA
- https://github.com/submissionconff/G2GNN
- https://github.com/zihan448/TopoImb
- https://www.dropbox.com/sh/8jaq9zekzl3khni/AAA0kNDs_UMxj4YbTEKKyiXna?dl=0
- https://github.com/Tommtang/ImGKB
- https://github.com/shuaiOKshuai/SOLT-GNN
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