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Revolutionizing Drug Coding with AI Technology

New AI methods streamline ATC coding and enhance healthcare efficiency.

Zijian Chen, John-Michael Gamble, Micaela Jantzi, John P. Hirdes, Jimmy Lin

― 7 min read


AI Transforms Drug Coding AI Transforms Drug Coding and accuracy in healthcare. Automated coding improves efficiency
Table of Contents

In healthcare, there's a lot of paperwork, and sometimes it feels like everyone is lost in a sea of prescriptions. One important part of this process is assigning codes to medications, known as Anatomical Therapeutic Chemical (ATC) codes. These codes help organizations keep track of drugs and ensure that everything is properly organized. However, doing this by hand can be super slow and requires a lot of expert help. Thankfully, technology is coming to the rescue!

The Technical Challenge

Assigning ATC codes is a bit like trying to find your way through a maze without a map. The ATC system is organized into a hierarchy with five levels, and each medication falls somewhere within this structure. The tricky part is figuring out exactly where it fits. With over 6,800 codes, this task can be overwhelming, and the manual coding process takes up a lot of time.

In addition, healthcare researchers often have to sift through unstructured clinical notes, which can be messy and full of jargon. For example, a doctor might write “the patient needs some heart medication,” but that doesn’t specify which one. This ambiguity makes coding even more challenging.

Why Not Use Technology?

Recently, large language models (LLMs)—a fancy name for advanced computer systems that understand human language—have become a hot topic. These models can generate text, answer questions, and even code medications. The catch? Many of these systems rely on sending sensitive data to a cloud service, raising privacy concerns. Therefore, a method that works directly on local computers is needed to keep patient information safe.

Proposed Solution

To tackle this problem, researchers have come up with a solution that uses LLMs but keeps everything on site to respect privacy. The idea is to train these models to assign ATC codes by guiding them through the coding process step by step, similar to a teacher helping a student navigate a test.

This method breaks down the coding task into manageable steps that align with the hierarchical structure of the ATC system. Instead of throwing all 6,800 codes at the model at once, they only present options relevant to each step. This significantly reduces the chances of making a mistake.

How the Models Work

The researchers tried out various models and focused on two: GPT-4o, a big, powerful model, and a smaller model called Llama 3.1. While GPT-4o is known for its impressive coding ability, Llama 3.1 is great for on-site use, allowing healthcare organizations to avoid sending any sensitive information to external servers.

The team tested these models using real-life data from Canada's healthcare system. They gathered information from various sources, like names of drugs approved for use and clinical notes about prescriptions. The results were promising!

The Results

When they tested their new coding method, GPT-4o scored a whopping 78% accuracy with its ATC coding. The smaller Llama 3.1, while not quite as high, managed to achieve an impressive 60%. Why is this impressive? Because these models were able to code medications without needing specific training on each individual drug description!

The researchers even found that when they fine-tuned the smaller model, it matched the accuracy of larger models under certain conditions. This was a great finding because it shows that smaller, less resource-intensive models can still get the job done.

Knowledge Grounding

The researchers also experimented with something called knowledge grounding. This means adding extra information, like definitions of medications, so that the models have context when they have to make decisions. Think of it as giving them a cheat sheet of sorts!

They presented various types of information to the models, including just the code, the code with a generic name, and the code with a definition from a professional medical source. They found that adding definitions led to slightly better results. It’s like giving the models a little extra boost before the big test!

Understanding Drug Coding

At its core, ATC coding is all about making sure that there is a standard way to classify drugs. Each ATC code is made up of letters and numbers that represent different levels:

  • Level 1: The main group the drug belongs to.
  • Level 2: The specific class of the drug.
  • Level 3: More detailed classification.
  • Level 4: Even finer details.
  • Level 5: The specific chemical name of the drug.

This organization is crucial for various reasons, from managing medication inventories to processing health insurance claims. It helps healthcare professionals and organizations keep everything in order.

Manual Coding vs. Automated Coding

Traditionally, ATC coding has been done by human experts who painstakingly go through drug records and assign codes. This process can take a long time and is prone to errors. In an era where everyone is seeking efficiency, it’s akin to using a typewriter in a world full of computers.

Now, with the help of LLMs, the process can become more accurate and faster. Automated ATC coding could allow healthcare professionals to focus more on patient care instead of paperwork.

Real-World Applications

So how does this help real-life people? Imagine a hospital where a doctor prescribes a medication. Instead of someone manually typing in the correct ATC code, the computer automatically does it. This quick turnaround ensures that patients receive their medications without delay and that insurance claims are processed rapidly, reducing frustration all around.

Moreover, researchers can now analyze medication usage across populations without getting bogged down by coding. This data can lead to valuable insights into drug utilization patterns, potentially leading to better health policies and practices.

Challenges in Implementation

While the research has shown a lot of promise, implementing automated ATC coding in real-world settings has its own challenges. One major hurdle is the reliability of the models, particularly when it comes to more complex clinical prescriptions. If a model misinterprets the drug name or selects the wrong code, it can lead to serious mistakes in patient records.

Another challenge is ensuring that the models continue to work well over time. As new drugs come onto the market and existing medications are reclassified, the models will need continual updates and retraining to remain accurate.

Conclusions

The good news is that this research has laid the groundwork for future developments in ATC coding. The combination of powerful language models and a focus on privacy can make a significant impact on the healthcare industry.

But let’s not pop the celebratory champagne just yet! There’s still work to be done. Stakeholders in healthcare need to consider how to improve the models, integrate them into existing systems, and ensure that they can adapt to changes in pharmaceuticals.

Automation is undoubtedly the future, but that doesn’t mean we’re giving up on people altogether. Instead, it allows healthcare professionals to focus on what really matters—taking care of patients.

Final Thoughts

In summary, the journey from manual ATC coding to automated methods using language models is an exciting adventure for the medical field. Although there are challenges, the potential benefits are vast. So, the next time you hear about a medication, remember there’s a lot more to it than meets the eye. With the help of technology, we’re not just prescribing medicine; we’re also writing a new chapter in healthcare history, one code at a time!

Original Source

Title: Zero-Shot ATC Coding with Large Language Models for Clinical Assessments

Abstract: Manual assignment of Anatomical Therapeutic Chemical (ATC) codes to prescription records is a significant bottleneck in healthcare research and operations at Ontario Health and InterRAI Canada, requiring extensive expert time and effort. To automate this process while maintaining data privacy, we develop a practical approach using locally deployable large language models (LLMs). Inspired by recent advances in automatic International Classification of Diseases (ICD) coding, our method frames ATC coding as a hierarchical information extraction task, guiding LLMs through the ATC ontology level by level. We evaluate our approach using GPT-4o as an accuracy ceiling and focus development on open-source Llama models suitable for privacy-sensitive deployment. Testing across Health Canada drug product data, the RABBITS benchmark, and real clinical notes from Ontario Health, our method achieves 78% exact match accuracy with GPT-4o and 60% with Llama 3.1 70B. We investigate knowledge grounding through drug definitions, finding modest improvements in accuracy. Further, we show that fine-tuned Llama 3.1 8B matches zero-shot Llama 3.1 70B accuracy, suggesting that effective ATC coding is feasible with smaller models. Our results demonstrate the feasibility of automatic ATC coding in privacy-sensitive healthcare environments, providing a foundation for future deployments.

Authors: Zijian Chen, John-Michael Gamble, Micaela Jantzi, John P. Hirdes, Jimmy Lin

Last Update: 2024-12-10 00:00:00

Language: English

Source URL: https://arxiv.org/abs/2412.07743

Source PDF: https://arxiv.org/pdf/2412.07743

Licence: https://creativecommons.org/licenses/by/4.0/

Changes: This summary was created with assistance from AI and may have inaccuracies. For accurate information, please refer to the original source documents linked here.

Thank you to arxiv for use of its open access interoperability.

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