New Insights on PFKFB Proteins and Energy Regulation
Research highlights the role of PFKFB proteins in energy management and cancer treatment.
Craig Eyster, Satoshi Matsuzaki, Atul Pranay, Jennifer R. Giorgione, Anna Faakye, Mostafa Ahmed, Kenneth M. Humphries
― 7 min read
Table of Contents
- Different Types of PFKFB Isoforms
- Challenges in Studying PFKFB
- Research Goals and Approaches
- Finding New Inhibitors
- Impact of B2 on Cellular Glycolysis
- Metabolomics and Understanding Cellular Changes
- Conclusion on PFKFB2 and Its Potential
- Future Directions
- The Takeaway
- Original Source
- Reference Links
PFKFB proteins are special enzymes that play a key role in how our body manages energy, especially through a process called glycolysis. Glycolysis is how our cells convert sugar into energy. PFKFB proteins help control how much of a certain molecule, fructose-2,6-bisphosphate (F-2,6-BP), is available in the cells. This molecule is important because it activates another enzyme called phosphofructokinase-1 (PFK-1), which is a crucial step in glycolysis. Therefore, whether PFKFB is helping to create or break down F-2,6-BP can directly influence how much energy our cells produce.
Different Types of PFKFB Isoforms
There are four main types, or isoforms, of PFKFB proteins. Each one has a unique job in different tissues:
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PFKFB2: This isoform is mainly found in the heart. It helps manage energy in heart cells, and its activity can be influenced by various proteins that send signals based on the body's needs, especially during times of energy stress or starvation.
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PFKFB1: This form can be found in skeletal muscle and the liver. It adjusts how our body uses energy based on what it needs at the moment. So, whether we need more energy or we're saving some, PFKFB1 is on the job.
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PFKFB3: This isoform often appears in a lot of cancer cells. It seems to help those cells use energy in a way that allows them to grow and multiply more quickly. This can be a problem because cancer cells tend to thrive on sugar more than normal cells.
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PFKFB4: This one usually stays in the testes but can become more active in certain types of cancer.
Given their roles in energy management, PFKFB enzymes are being looked at as possible targets for new treatments. This could mean developing drugs that might help balance energy use in diseases like diabetes and cancer.
Challenges in Studying PFKFB
While the potential benefits of targeting PFKFB are exciting, there are challenges. For one, it’s tough to measure how active these enzymes are in the lab. The key molecule they produce, F-2,6-BP, doesn’t stick around long enough to make measurements easy, and finding good ways to measure it is not simple. On top of that, there aren’t many commercial standards to help researchers.
Research Goals and Approaches
To better understand PFKFB2, researchers aimed to create a way to measure its activity and screen for small molecules that could affect it. They used a method where the PFKFB2 protein was grown in bacteria. This allowed them to produce the protein in larger quantities. Once the protein was made, it was checked to see if it was modified by something called phosphorylation, which can change how active the protein is.
The researchers found that when they purified PFKFB2 from these bacteria, it had a form of phosphorylation that could be reversed. This means they could potentially learn how to manipulate its activity by adjusting the phosphorylation state.
Inhibitors
Finding NewOnce they had a good method for measuring PFKFB2, researchers wanted to find compounds that could either activate or inhibit this enzyme's activity. They used a computer program that simulates how potential small molecules might interact with PFKFB2. After screening a huge library of small molecules, they found one that looked particularly promising as an inhibitor. This compound was named B2.
The researchers tested B2 to see how well it could block PFKFB2 and PFKFB3 activity. They found that it was effective and different enough from other known inhibitors. This is exciting because unique inhibitors might work better or differently compared to existing treatments.
Impact of B2 on Cellular Glycolysis
Researchers then wanted to see how effective B2 was at lowering glycolysis in living cells. They tested it on a type of kidney cancer cell line known for high glycolysis rates. They found that treatment with B2 lowered the energy production in these cells, similar to what was seen with another known inhibitor. However, B2 also affected the maximum energy production capacity differently than the other inhibitor.
Through advanced methods like a Seahorse analysis, they explored how B2 changed the rates of glycolysis in these cells. They discovered that it significantly lowered the levels of certain sugar-building blocks used in energy production, showing it was having a real impact on how these cancer cells were using energy.
Metabolomics and Understanding Cellular Changes
To take things a step further, researchers looked at what was happening to various chemicals involved in energy processes after treatment with B2. They extracted metabolites from treated cells and analyzed them with sophisticated equipment. This process showed interesting changes in the levels of important metabolic intermediates, providing insight into how B2 was affecting energy metabolism in the cells.
They utilized principal component analysis to understand changes in the cellular makeup better. The findings revealed that different treatments led to distinct changes in cellular metabolism, helping to clarify how B2 worked compared to other inhibitors.
Conclusion on PFKFB2 and Its Potential
The work done shows that PFKFB2 is a significant player in managing energy in our cells, especially in response to conditions like diabetes and cancer. By identifying B2 as a new inhibitor, it opens avenues for potential treatments targeting glycolysis in various diseases.
The researchers faced many challenges, but their dedication to understanding how PFKFB2 functions and how it can be manipulated for therapeutic gain is a promising step forward. This could lead to better therapies for conditions where energy regulation goes awry, like in many cancers or metabolic diseases.
While more research is needed to narrow down the exact mechanisms and pathways involved, the findings highlight the importance of continuing to explore how we can target these enzymes. The road ahead looks interesting, and who knows, maybe B2 will become the superstar in the world of metabolic research!
Future Directions
Moving forward, there are several areas for future exploration. One key area is to examine how B2 specifically interacts with PFKFB2 and if it affects any other molecules involved in energy metabolism. Understanding this could lead to more precise drug development.
Another interesting area is whether similar compounds can be found that might target different PFKFB isoforms selectively. Since each isoform has unique functions and roles in various tissues, finding compounds that can focus on one isoform over another could lead to tailored therapies for specific diseases.
Experiments could also look at how B2 and other inhibitors might work in combination with existing cancer treatments. This may enhance their effectiveness and provide new ways to combat cancer cells.
Lastly, researchers should consider studying the long-term effects of these inhibitors on metabolism and energy regulation in living organisms. This will offer a broader view of how they might fare in actual therapeutic settings.
The Takeaway
In summary, PFKFB enzymes serve as crucial regulators of energy metabolism in our body. Their roles in diseases such as cancer and diabetes make them attractive targets for new therapies. The newly discovered inhibitor B2 provides a fresh avenue for exploring how we can manipulate these enzymes to manage energy production more effectively in different disease contexts. Researchers are only scratching the surface, but the future holds exciting possibilities for understanding and harnessing these enzymes to improve health outcomes.
With each study and each discovery, the scientific community gets closer to unraveling the complexities of metabolism, and who knows? Maybe someday, the right combination of inhibitors will lead to breakthroughs that help us all live healthier lives. Who would have thought that a little protein could be a big deal in the world of health?
Original Source
Title: Mechanistic studies of PFKFB2 reveals a novel inhibitor of its kinase activity
Abstract: The 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase (PFKFB) family of proteins are bifunctional enzymes that are of clinical relevance because of their roles in regulating glycolysis in insulin sensitive tissues and cancer. Here, we sought to express recombinant PFKFB2 and develop a robust protocol to measure its kinase activity. These studies resulted in the unexpected finding that bacterially expressed PFKFB2 is phosphorylated in situ on Ser483 but is not a result of autophosphorylation. Recombinant PFKFB2 was used to develop an enzymatic assay to test a library of molecules selected by the Atomwise AtomNet(R) AI platform. This resulted in the identification of a new inhibitor, B2, that inhibits PFKFB2 (IC50 3.29 M) and PFKFB3 (IC50 11.89 M). A-498 cells, which express both PFKFB2 and PFKFB3, were treated with B2. Seahorse XFe analysis revealed B2 inhibited cellular glycolysis and glycolytic capacity. Targeted LC/MS analysis showed B2 decreased fructose-1,6-bisphosphate and downstream glycolytic intermediates but increased fructose-6-phosphate levels, which is consistent with an inhibitory effect on PFK-1 activity. The LC/MS metabolic profile of A-498 cells treated under identical conditions with the known PFKFB3 inhibitor, PFK158, was distinct from that induced by B2. These results thus demonstrate the identification and validation of a new PFKFB kinase inhibitor.
Authors: Craig Eyster, Satoshi Matsuzaki, Atul Pranay, Jennifer R. Giorgione, Anna Faakye, Mostafa Ahmed, Kenneth M. Humphries
Last Update: 2024-12-25 00:00:00
Language: English
Source URL: https://www.biorxiv.org/content/10.1101/2024.12.25.630325
Source PDF: https://www.biorxiv.org/content/10.1101/2024.12.25.630325.full.pdf
Licence: https://creativecommons.org/licenses/by/4.0/
Changes: This summary was created with assistance from AI and may have inaccuracies. For accurate information, please refer to the original source documents linked here.
Thank you to biorxiv for use of its open access interoperability.