Transparent Graphene MEAs: A New Approach to Neuron Study
Scientists use transparent graphene MEAs to study neuron function in Niemann-Pick disease.
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Scientists are always looking for better ways to understand how our brains work. One area of focus is how neurons, the cells that help transmit signals in the brain, communicate with one another. Traditional methods for studying neuron behavior can be quite limiting. Recently, new tools called Microelectrode Arrays (MEAs) have been developed to help researchers monitor neurons over longer periods and on a larger scale. MEAs can capture data without needing to penetrate the cell, making the process less intrusive.
However, many existing MEAs have a drawback: they are not see-through. This lack of transparency makes it hard for scientists to use them alongside advanced imaging techniques, which can provide a visual understanding of neuron structure and function. To overcome this issue, scientists have developed transparent MEAs, which allow them to combine electrical recordings of neuron activity with visual observations using microscopes. Yet, these transparent devices often struggle to maintain high-quality electrical signals while being see-through.
Graphene material has emerged as a solution. Graphene is a thin sheet of carbon atoms arranged in a single layer. It is known for its excellent electrical properties and transparency, making it an ideal candidate for use in transparent MEAs. Graphene allows scientists to monitor both the structures and activities of neurons effectively. In this article, we will explore the benefits of graphene MEAs and how they can be used to study important brain disorders, particularly Niemann-Pick disease type C (NPC).
The Importance of Neuron Monitoring
Neurons communicate through electrical signals called action potentials. When a neuron sends a signal, it can exchange information with many other neurons in the brain, allowing for a coordinated response. However, when scientists monitor neurons, they often pick up signals from multiple neurons at once, making it difficult to pinpoint the activity of individual cells. This overlapping signals problem complicates the analysis of data gathered from MEAs.
Efforts to address this have led researchers to explore Machine Learning (ML) methods for analyzing neuron data, particularly for sorting out these overlapping signals. By leveraging ML techniques, it's possible to improve the accuracy of identifying which neuron is firing and when.
The Journey of Transparent MEAs Using Graphene
To create transparent MEAs, researchers have turned to graphene due to its remarkable properties. Graphene is not only highly conductive, but it is also nearly invisible when viewed under light. This allows scientists to use advanced imaging techniques while still gathering electrical activity data.
The combination of transparent graphene MEAs and imaging techniques enables scientists to visualize neuron behavior and structure simultaneously. For instance, they can see how neurons interact with one another while also tracking their electrical activity. This dual-functionality is vital for studying complex brain functions and diseases, making it easier to observe how certain drugs or conditions affect neuronal activity.
Studying Niemann-Pick Disease Type C
Niemann-Pick disease type C (NPC) is a rare genetic disorder that affects how cholesterol is processed in the body, leading to a buildup of cholesterol within cells. This buildup can disrupt normal neuron function and communication, ultimately causing cognitive decline and other symptoms.
In studies of NPC, researchers have focused on how these cholesterol-related issues impact neuron behavior. Using transparent graphene MEAs, scientists can monitor how NPC affects neuronal activity over time, allowing them to see how the disease progresses and impacts cell structure.
The Experimental Approach
In the lab, researchers cultured primary hippocampal neurons on graphene MEAs. These neurons were allowed to grow and mature for a few weeks before beginning data collection. During this time, the neurons were transduced with a special virus that made them glow under specific light, allowing for Calcium Imaging. Calcium levels in neurons are closely tied to their activity, so measuring these levels is essential for understanding how neurons communicate.
After establishing a baseline of how neurons behave under normal conditions, researchers introduced a substance called U18666A to simulate NPC symptoms. By comparing the behavior of neurons before and after treatment, scientists can observe significant changes in neuronal activity and network behavior.
Results of the Study
Using the combination of graphene MEAs and imaging techniques, scientists have been able to gather important data about how NPC affects neurons. They found that treated neurons exhibited a decline in electrical activity over time, suggesting that the disease disrupts normal signaling processes. Interestingly, there was a brief increase in calcium signaling before it dropped sharply, indicating that NPC may initially cause neurons to behave erratically before leading to degeneration.
Corresponding changes in neuron structure were also observed. As neurons began to lose function, researchers noted changes in cell density and health, which matched previous findings in models of NPC. This correlation is crucial for understanding how NPC progresses and the cellular mechanisms involved.
Advanced Imaging Techniques
To gain deeper insights, researchers utilized a high-resolution imaging method called Structured Illumination Microscopy (SIM). This technique provided a clearer view of individual neuron structures and their changes over time. The advanced imaging capabilities of SIM allowed scientists to observe fine details that traditional microscopy might miss, such as how the shape of neuron structures changes in response to calcium activity.
In their observations, researchers noted that synaptic structures, which are essential for neuron-to-neuron communication, exhibited dynamic alterations. The results revealed that synaptic boutons and other components could change in size and shape during neuronal activity, providing insights into the underlying processes that affect neuron function.
Machine Learning for Data Analysis
Given the complexity of the data collected from graphene MEAs, researchers employed machine learning to enhance the analysis process. By feeding the system large datasets, scientists were able to improve the identification of neuronal activity and enhance understanding of how these neurons correlated in functioning networks.
Machine learning techniques, such as deep clustering, were applied to distinguish overlapping signals from multiple neurons. By efficiently identifying distinct spike patterns, researchers could accurately sort and categorize neuronal activity, providing a clearer picture of how neurons interact with one another.
Conclusions and Future Directions
The integration of transparent graphene MEAs with advanced imaging and machine learning provides a powerful platform for studying neurons and their behavior. This combination allows researchers to monitor neuronal activity and structure simultaneously, opening new avenues for understanding brain function and disease.
Going forward, continued research using this innovative technology may reveal further insights into not only Niemann-Pick disease type C but other neurodegenerative diseases and disorders. As scientists refine their approaches and overcome technical challenges, such as improving the fabrication of MEAs, the potential for groundbreaking discoveries in neuroscience remains significant.
Understanding how diseases like NPC impact neurons at both cellular and structural levels is vital for developing effective treatments and therapies. With transparent graphene MEAs, researchers have an unprecedented opportunity to explore the complexities of neuronal behavior in health and disease, ultimately advancing our understanding of the brain and improving outcomes for individuals affected by neurodegenerative conditions.
Title: Graphene microelectrode arrays, 4D structured illumination microscopy, and a machine learning-based spike sorting algorithm permit the analysis of ultrastructural neuronal changes during neuronal signalling in a model of Niemann-Pick disease type C
Abstract: Simultaneously recording network activity and ultrastructural changes of the synapse is essential for advancing our understanding of the basis of neuronal functions. However, the rapid millisecond-scale fluctuations in neuronal activity and the subtle sub-diffraction resolution changes of synaptic morphology pose significant challenges to this endeavour. Here, we use graphene microelectrode arrays (G-MEAs) to address these challenges, as they are compatible with high spatial resolution imaging across various scales as well as high temporal resolution electrophysiological recordings. Furthermore, alongside G-MEAs, we deploy an easy-to-implement machine learning-based algorithm to efficiently process the large datasets collected from MEA recordings. We demonstrate that the combined use of G-MEAs, machine learning (ML)-based spike analysis, and four-dimensional (4D) structured illumination microscopy (SIM) enables the monitoring of the impact of disease progression on hippocampal neurons which have been treated with an intracellular cholesterol transport inhibitor mimicking Niemann-Pick disease type C (NPC) and show that synaptic boutons, compared to untreated controls, significantly increase in size, which leads to a loss in neuronal signalling capacity.
Authors: Gabriele S. Kaminski Schierle, M. Lu, E. Hui, M. Brockhoff, J. Trauble, A. Fernandez-Villegas, O. J. Burton, J. Lamb, E. Ward, P. J. Hooper, W. Tadbier, N. F. Laubli, S. Hofmann, C. F. Kaminski, A. Lombardo
Last Update: 2024-02-24 00:00:00
Language: English
Source URL: https://www.biorxiv.org/content/10.1101/2024.02.22.581570
Source PDF: https://www.biorxiv.org/content/10.1101/2024.02.22.581570.full.pdf
Licence: https://creativecommons.org/licenses/by/4.0/
Changes: This summary was created with assistance from AI and may have inaccuracies. For accurate information, please refer to the original source documents linked here.
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