FANCD2 Mutation: A Potential Marker in CML Progression
Study reveals FANCD2 mutation as a new marker for CML progression.
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Table of Contents
Chronic Myeloid Leukemia (CML) is a type of blood cancer that develops from stem cells. This illness is linked to a specific Genetic change that results in a faulty chromosome known as the Philadelphia chromosome. This abnormality causes the formation of a fusion gene called BCR-ABL, leading to the growth of cancer cells in the blood-forming tissues.
CML is not very common, with around 0.6 to 2.0 cases for every 100,000 people each year. It accounts for about 10-15% of new adult leukemia cases. Most patients are diagnosed between the ages of 57 and 60, with more men diagnosed than women.
Treatment Options for CML
Recent advancements have led to the development of drugs called tyrosine kinase inhibitors (TKIs). These drugs have significantly improved survival rates for people with CML, especially during the chronic phase. In technologically advanced countries, the survival rates have risen from about 20% to as high as 80-90%.
Despite these advancements, some patients do not respond well to TKIs, especially those in later stages of the illness, such as the accelerated and blast crisis phases. For patients in these stages, treatment options are limited, and the average survival time can be less than a year.
Recognizing patients at risk of progressing to these later stages can allow doctors to make timely treatment decisions. However, there are currently no specific tests to identify which patients are at higher risk.
Progression
Genetic Factors in CMLCancer can be influenced by various genetic factors that lead to changes in DNA repair ability, resulting in unstable genomes. One rare genetic disorder associated with such issues is Fanconi Anemia (FA), which results from Mutations in genes responsible for DNA repair.
The FA pathway is critical in maintaining DNA stability, and mutations in these genes can increase the risk of developing various cancers. Recently, a specific mutation in the FANCD2 gene has been linked to the advanced stage of CML known as blast crisis.
This study looks into the potential of the FANCD2 mutation as a marker for early CML progression. This would help identify patients in the accelerated phase of CML who might be at risk of moving toward more severe stages.
Study Overview
The research involved CML patients at a medical center over a few years. It included 183 patients diagnosed with CML. Among them, 60 were in the accelerated phase, while the rest were in the chronic phase, serving as a control group. Most patients began their treatment with the drug imatinib. If they did not respond, they were switched to another drug called nilotinib.
All participants provided consent for the study, which followed ethical guidelines. Blood samples were collected from patients at regular intervals, and their DNA was extracted for further analysis.
Method of Genetic Analysis
To examine the FANCD2 gene, researchers used advanced sequencing technology to identify any mutations associated with CML progression. The process included breaking down the DNA, amplifying it, and then analyzing the mutations present in specific regions of the gene.
The findings revealed a unique mutation in the FANCD2 gene that was consistently found in all patients with accelerated CML but not in those with chronic CML or healthy individuals. This suggests a strong link between this mutation and disease progression.
Validation of Findings
To ensure the accuracy of these findings, another method called Sanger sequencing was employed to confirm the presence of the mutation. This method provided additional evidence that the FANCD2 mutation could be a reliable indicator of early CML progression.
Overall, the research demonstrated that all patients in the accelerated phase had this mutation, while it was absent in healthy control subjects and those in the chronic phase.
Implications of the Study
The results suggest that the mutation in the FANCD2 gene could serve as an important marker to identify patients in the earlier stages of CML who are at risk of progressing to more severe forms of the disease. Recognizing this risk early on could allow doctors to implement treatment strategies aimed at preventing advancement.
The research highlights the importance of genetic testing in managing CML, as identifying specific mutations may guide treatment decisions and improve patient outcomes.
The Role of the FANCD2 Gene
The FANCD2 gene is crucial for the repair of damaged DNA. If it is mutated, the body struggles to fix DNA breaks, leading to increased genomic instability, which can contribute to the development of various cancers, including CML.
Although the exact function of the FANCD2 mutation in CML isn't fully understood, it is suspected that it disrupts the ability of the gene to repair DNA properly, fueling the progression of the disease.
Future Directions
This indicates a need for further research to understand the mutation's exact role and how it can be utilized in clinical settings. More studies may focus on confirming the mutation's effectiveness as a biomarker and exploring whether it can be targeted in treatment strategies.
In conclusion, the FANCD2 gene mutation may play a significant role in advancing our understanding and management of CML. As research progresses, the hope is to improve detection and treatment options for those affected by this blood cancer.
Conclusion
Chronic Myeloid Leukemia can be a challenging illness, especially in its later stages. The identification of genetic markers like the FANCD2 mutation offers a promising avenue for enhancing patient care. By recognizing the risk of disease progression early, healthcare providers can take proactive measures to improve patient outcomes and quality of life. Understanding the genetic underpinnings of CML is essential for developing better treatment strategies and ultimately leading to improved survival rates for those diagnosed with this condition.
Title: Utilization of targeted resequencing for clinical validation of mutated FANCD2 gene as a promising molecular biomarker of early disease progression in Chronic Myeloid Leukemia
Abstract: Chronic Myeloid Leukemia, resulting due to chromosomal aberration t(9;22) through formation of oncogenic BCR-ABL fusion oncogene. Modern BCR-ABL inhibitors, called TKIs, have revolutionized CML treatment. CML has three stages: chronic, accelerated, and blast crisis. TKIs work well in CP-CML, where patients survive as long as the normal population, but they dont work in AP- and BC-CML. Even with advances in treatment, BC-CML has an average overall survival of less than a year, giving oncologists little time to clinically intervene. Oncologists can delay or prevent CML advancement by detecting patients at risk of disease progression early and making timely treatment decisions, especially with third and fourth generation TKIs. However, no universal molecular biomarkers exist to diagnose CML patient groups at risk of disease progression. A recent study found that all BC-CML patients have mutant FANCD2. Our study was designed to detect mutant FANCD2 in AP-CML (early progression phase) to investigate its potential as a novel biomarker of early CML progression from chronic phase to accelerated phase due to the urgent need for such a biomarker. Our study comprised of 123 CP-CML (control group) and 60 AP-CML patients (as experimental group) from Hayatabad Medical Complex, Peshawar, Pakistan, from Jan 2020 to July 2023. DNA was extracted from the patients and FANCD2 gene was sequenced using Illumina next generation sequencer (NGS) Illumina MiSeq sequencer. NGS analysis revealed a unique splice site mutation in FANCD2 gene (c. 2022-5C>T). This mutation was detected in all CP-CML patients but in none of CP-CML. The mutation was confirmed by Sanger sequencing. FANCD2 is member of Fanconi anemia (FA-) pathway gene involved in DNA repair and genomic instability. Therefore, our studies show that FANCD2 (c. 2022-5C>T) mutation as a very specific molecular biomarker for early CML progression. We recommend to clinical validate this biomarker is prospective clinical trials.
Authors: Zafar Iqbal, N. Alanzazi, A. Siyal, M. Absar, M. A. Shammas, A. Mahmood, S. Al-Mukhaylid
Last Update: 2024-01-29 00:00:00
Language: English
Source URL: https://www.medrxiv.org/content/10.1101/2023.12.19.23300103
Source PDF: https://www.medrxiv.org/content/10.1101/2023.12.19.23300103.full.pdf
Licence: https://creativecommons.org/licenses/by-nc/4.0/
Changes: This summary was created with assistance from AI and may have inaccuracies. For accurate information, please refer to the original source documents linked here.
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