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Optimizing BIT1 for Plasma Simulations

New enhancements to BIT1 improve plasma simulation performance using advanced computing techniques.

― 6 min read


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Plasma simulations are essential for understanding how plasma interacts with different materials, especially in fusion energy devices. These simulations help us design and improve devices like tokamaks, which are important for nuclear fusion research. One of the key tools for simulating plasma behavior is a software called BIT1, which is designed to model these interactions effectively.

What is BIT1?

BIT1 is a specialized code that simulates how plasma behaves when it comes into contact with different surfaces. It pays particular attention to how energy is distributed on components called Divertors, which help manage the heat and particles produced in fusion reactions. The original version of BIT1 used a method called MPI, which is a way for computers to communicate when they are working together on a task. However, this version did not take advantage of modern hardware like GPUs, which can greatly speed up calculations.

Challenges with BIT1

BIT1 faced two significant issues. First, it only used MPI for parallel communication, which is not the most efficient way to share data on the same computer. Shared-memory approaches could make better use of available resources. Second, BIT1 did not support GPUs, which are essential for fast computation in many scientific applications. To solve these issues, researchers set out to create a new version of BIT1 that would use both MPI and GPU technologies.

Improving Performance with OpenMP and OpenACC

To optimize BIT1, the researchers introduced two programming models: OpenMP and OpenACC. These models allow the code to run more efficiently on multicore systems and utilize GPU resources effectively. By using OpenMP, they could take better advantage of multiple CPU cores, and OpenACC enabled the code to offload some tasks to GPUs.

Hybrid MPI and OpenMP

The new version of BIT1 was designed to run in a hybrid way; it could use MPI for communication between different computers and OpenMP for parallel tasks within a single computer. This flexibility improved performance significantly. By using task-based parallelism, they managed to balance the workload more effectively, which helped avoid situations where some parts of the program were overloaded while others were idle.

GPU Acceleration

Next, the researchers developed the first version of BIT1 that could utilize GPUs for calculations. Using OpenACC, they explored two different data movement strategies: unified memory and explicit data movement. Unified memory simplifies the process of sharing data between the CPU and GPU, while explicit data movement requires more careful control of what data is transferred and when.

Early Results

Initial tests on high-performance computing systems showed promising results. When using OpenMP and OpenACC, the new version of BIT1 achieved about a 42% improvement in performance during early testing. As the researchers increased the number of MPI ranks, they noticed an additional performance boost of approximately 38%. This demonstrated that their hybrid approach was effective, allowing BIT1 to run smoother and faster.

Importance of Plasma Simulations

Simulating plasma behavior is crucial for developing fusion devices. During fusion reactions, high-energy neutrons are produced, which can damage the internal surfaces of these devices. The divertor plays a vital role by directing the plasma flow to mitigate these damaging effects. BIT1 helps researchers understand how to manage heat and particle flux in these systems, ensuring that conditions remain optimal for the fusion process.

BIT1's Unique Features

BIT1 is distinguished by its ability to accurately model processes at the plasma-wall interface, such as sputtering and collisions. This accuracy is critical for assessing how materials behave under extreme conditions found in fusion devices. The code is scalable, allowing it to run on thousands of processors, making it a valuable tool for studying complex plasma systems.

Previous Work and Findings

Before this optimization effort, previous studies highlighted performance bottlenecks in BIT1. Researchers had pointed out that the particle mover function, responsible for tracking the movement of millions of particles, was one of the most demanding parts of the code in terms of computational resources. To address this, the team focused on optimizing the particle mover, which resulted in significant performance gains.

Methodology and Experimental Setup

The research team set up a systematic approach to investigate how well they could port BIT1's particle mover to utilize both OpenMP and OpenACC. Using two powerful computer systems, they designed their experiments around specific simulation scenarios, like neutral particle ionization resulting from interactions with electrons.

Computing Resources

The two systems used for testing were high-performance computing (HPC) platforms. One system had many CPU nodes that featured powerful processors and a sophisticated interconnect network. The other system included NVIDIA GPUs, which are well-known for their performance in handling parallel tasks.

Performance Testing and Results

The core focus of this research was on the particle mover function within BIT1. The team analyzed how well the code performed in various configurations, comparing execution times with different numbers of processor ranks.

Hybrid BIT1 Performance

Results showed that using both MPI and OpenMP significantly reduced the total execution time for simulations. The hybrid versions of BIT1 demonstrated better scalability, especially when the number of MPI ranks increased.

GPU Performance

The researchers tested the GPU performance of BIT1 using both explicit and unified memory strategies. They found that the primary worker responsible for particle movement consumed most of the GPU execution time. This indicated that optimizing the data transfer between the CPU and GPU was essential for improving overall performance.

Data Transfer Insights

Profiling data showed that a significant amount of time was spent transferring data from the CPU to the GPU. This highlighted the need for strategies to minimize data movement, such as overlapping computation and communication processes, which would help reduce execution time.

Future Directions

The findings from this work suggest several promising avenues for future research. The team plans to continue refining how BIT1 utilizes GPU resources. Exploring advanced algorithms and batch processing strategies could further enhance particle movement efficiency.

Additionally, collaboration with experimental data can help validate simulations, making them more reliable and applicable to real-world scenarios in fusion energy research.

Conclusion

Optimizing BIT1 has shown substantial improvement in its capability to simulate plasma-material interactions. By adopting hybrid MPI and OpenMP/OpenACC approaches, researchers can leverage the strengths of both traditional CPU processing and modern GPU acceleration. This work not only enhances BIT1's performance but also contributes to the broader goal of advancing plasma science and fusion energy research. As technology progresses, the insights gained from optimizing BIT1 will play a critical role in developing efficient fusion devices to help meet future energy needs.

Original Source

Title: Optimizing BIT1, a Particle-in-Cell Monte Carlo Code, with OpenMP/OpenACC and GPU Acceleration

Abstract: On the path toward developing the first fusion energy devices, plasma simulations have become indispensable tools for supporting the design and development of fusion machines. Among these critical simulation tools, BIT1 is an advanced Particle-in-Cell code with Monte Carlo collisions, specifically designed for modeling plasma-material interaction and, in particular, analyzing the power load distribution on tokamak divertors. The current implementation of BIT1 relies exclusively on MPI for parallel communication and lacks support for GPUs. In this work, we address these limitations by designing and implementing a hybrid, shared-memory version of BIT1 capable of utilizing GPUs. For shared-memory parallelization, we rely on OpenMP and OpenACC, using a task-based approach to mitigate load-imbalance issues in the particle mover. On an HPE Cray EX computing node, we observe an initial performance improvement of approximately 42%, with scalable performance showing an enhancement of about 38% when using 8 MPI ranks. Still relying on OpenMP and OpenACC, we introduce the first version of BIT1 capable of using GPUs. We investigate two different data movement strategies: unified memory and explicit data movement. Overall, we report BIT1 data transfer findings during each PIC cycle. Among BIT1 GPU implementations, we demonstrate performance improvement through concurrent GPU utilization, especially when MPI ranks are assigned to dedicated GPUs. Finally, we analyze the performance of the first BIT1 GPU porting with the NVIDIA Nsight tools to further our understanding of BIT1 computational efficiency for large-scale plasma simulations, capable of exploiting current supercomputer infrastructures.

Authors: Jeremy J. Williams, Felix Liu, David Tskhakaya, Stefan Costea, Ales Podolnik, Stefano Markidis

Last Update: 2024-09-06 00:00:00

Language: English

Source URL: https://arxiv.org/abs/2404.10270

Source PDF: https://arxiv.org/pdf/2404.10270

Licence: https://creativecommons.org/licenses/by/4.0/

Changes: This summary was created with assistance from AI and may have inaccuracies. For accurate information, please refer to the original source documents linked here.

Thank you to arxiv for use of its open access interoperability.

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