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The Rise of C. incerta in Protein Production

C. incerta shows promise for enhancing protein production in biotechnology.

João Vitor Dutra Molino, K. Kang, E. do Espirito Santo, C. J. Diaz, A. Oliver, L. Saxton, L. May, S. Mayfield

― 5 min read


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Table of Contents

The production of proteins using recombinant DNA technology has changed how we create medicines and study biological systems. These proteins, often referred to as biologics, are crucial in understanding how cells and living organisms operate. Different systems are used to produce these proteins, including bacteria, yeast, and mammalian cells. Each system has its own strengths and weaknesses, and researchers are constantly looking for new ways to improve protein production.

Common Production Systems

Bacterial Systems

Escherichia coli (E. coli) is the most common bacteria used to produce simple recombinant proteins. E. coli can produce large amounts of protein, sometimes making up 50% of the total protein in the cells. However, it has limitations, such as difficulty in secreting proteins outside the cell and a lack of complex modifications that many proteins require to function properly.

Yeast Systems

Yeast, such as Saccharomyces cerevisiae and Komagataella pastoris, has become popular because it can produce proteins in a more complex way than bacteria. Yeast can perform some of the modifications that proteins need and can also fold proteins properly. K. pastoris is often preferred over S. cerevisiae because it can produce even higher levels of protein. However, growing K. pastoris on a large scale can present safety risks since it requires methanol, which is flammable.

Mammalian Systems

Mammalian cells are typically used for more complex proteins, especially those meant for medical use. They can create proteins with the necessary modifications that bacteria or yeast cannot. However, mammalian systems are expensive to maintain, and the risk of viral infections in cell cultures adds extra challenges.

The Promise of Microalgae

Microalgae represent a new and exciting option for protein production. They can be engineered to produce not just proteins but also biofuels and biodegradable plastics. Microalgae are already used in various industries, such as animal feed and cosmetics. One microalga, Chlamydomonas reinhardtii, is a popular model for scientific study because of its well-understood genetics.

Challenges in Microalgae Production

While microalgae show great potential, the tools and methods for genetic engineering these organisms need improvement. Researchers must address issues like low expression levels of desired proteins and genetic silencing, which can reduce output.

Exploring Chlamydomonas incerta

Chlamydomonas incerta, a close relative to C. reinhardtii, has not yet been fully explored for protein expression. This algae lacks established methods for transformation and mating, which are necessary for genetic engineering. Researchers transformed C. incerta using vectors designed for C. reinhardtii, aiming to express different proteins.

Targeting Protein Expression

The study focused on expressing the MCherry protein, a type of fluorescent protein, in different parts of C. incerta cells. Researchers created various vectors to target mCherry to the cytosol, cell membrane, and cell wall.

Observations from Transformations

After transforming C. incerta, researchers noticed that the algae expressed mCherry in different ways. For example, when mCherry was targeted to the cytosol, it showed clear fluorescence, outlining key cellular structures. The fluorescence results indicated that C. incerta has the capability to effectively express and localize proteins, suggesting it could be a good system for producing recombinant proteins.

Comparing C. incerta and C. reinhardtii

Researchers conducted experiments to compare how well C. incerta and C. reinhardtii produced mCherry. Findings showed that C. incerta had about 3.5 times more fluorescence than C. reinhardtii, indicating a much higher level of protein production. This suggests that C. incerta could be a more efficient host for producing recombinant proteins.

Expressing Enzymes

In addition to mCherry, researchers also aimed to express Xylanase, an enzyme that breaks down plant materials. Transformations showed that C. incerta could produce xylanase effectively, although the transformation efficiency was lower compared to C. reinhardtii.

The Potential of PHL7

Another enzyme tested was PHL7, which can break down plastics. The researchers found that while C. incerta had lower transformation efficiency, it still showed promise for producing this enzyme. The presence of active PHL7 in both C. incerta and C. reinhardtii demonstrated that both organisms could potentially be used for biotechnological applications.

Hybridization of Algae

Because C. incerta showed better protein secretion, researchers explored the idea of hybridizing it with C. reinhardtii to combine desirable traits. Hybridization could increase genetic diversity and adaptability to extreme environments.

Successful Hybridization Efforts

Researchers successfully created hybrids by fusing C. incerta and C. reinhardtii cells. The resulting hybrids showed resistance to both bleomycin and hygromycin, indicating they inherited traits from both parent strains.

Conclusion

This research highlights C. incerta as a promising platform for producing recombinant proteins. Its higher expression levels compared to C. reinhardtii suggest that it could be a valuable resource for various biotechnological applications. The successful hybridizations open new possibilities for creating strains with improved traits. Overall, the study lays the groundwork for further exploration of microalgae in biotechnology, focusing on sustainable production processes.

Future Directions

Researchers are keen to continue improving transformation techniques for C. incerta and exploring its capabilities for producing a range of proteins. The goal is to harness its potential for practical applications, enabling contributions to fields like medicine, environmental solutions, and sustainable practices.

Original Source

Title: Establishing the green algae Chlamydomonas incerta as a platform for recombinant protein production

Abstract: Chlamydomonas incerta, a genetically close relative of the model green alga Chlamydomonas reinhardtii, shows significant potential as a host for recombinant protein expression. Because of the close genetic relationship between C. incerta and C. reinhardtii, this species offers an additional reference point for advancing our understanding of photosynthetic organisms, and also provides a potential new candidate for biotechnological applications. This study investigates C. incertas capacity to express three recombinant proteins: the fluorescent protein mCherry, the hemicellulose-degrading enzyme xylanase, and the plastic-degrading enzyme PHL7. We have also examined the capacity to target protein expression to various cellular compartments in this alga, including the cytosol, secretory pathway, cytoplasmic membrane, and cell wall. When compared directly with C. reinhardtii, C. incerta exhibited a distinct but notable capacity for recombinant protein production. Cellular transformation with a vector encoding mCherry revealed that C. incerta produced approximately 3.5 times higher fluorescence levels and a 3.7-fold increase in immunoblot intensity compared to C. reinhardtii. For xylanase expression and secretion, both C. incerta and C. reinhardtii showed similar secretion capacities and enzymatic activities, with comparable xylan degradation rates, highlighting the industrial applicability of xylanase expression in microalgae. Finally, C. incerta showed comparable PHL7 activity levels to C. reinhardtii, as demonstrated by the in vitro degradation of a polyester polyurethane suspension, Impranil(R) DLN. Finally, we also explored the potential of cellular fusion for the generation of genetic hybrids between C. incerta and C. reinhardtii as a means to enhance phenotypic diversity and augment genetic variation. We were able to generate genetic fusion that could exchange both the recombinant protein genes, as well as associated selectable marker genes into recombinant offspring. These findings emphasize C. incertas potential as a robust platform for recombinant protein production, and as a powerful tool for gaining a better understanding of microalgal biology. GRAPHICAL ABSTRACT O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=126 SRC="FIGDIR/small/618925v1_ufig1.gif" ALT="Figure 1"> View larger version (25K): [email protected]@148ad36org.highwire.dtl.DTLVardef@63b5e9org.highwire.dtl.DTLVardef@3be081_HPS_FORMAT_FIGEXP M_FIG C_FIG

Authors: João Vitor Dutra Molino, K. Kang, E. do Espirito Santo, C. J. Diaz, A. Oliver, L. Saxton, L. May, S. Mayfield

Last Update: 2024-10-25 00:00:00

Language: English

Source URL: https://www.biorxiv.org/content/10.1101/2024.10.25.618925

Source PDF: https://www.biorxiv.org/content/10.1101/2024.10.25.618925.full.pdf

Licence: https://creativecommons.org/licenses/by/4.0/

Changes: This summary was created with assistance from AI and may have inaccuracies. For accurate information, please refer to the original source documents linked here.

Thank you to biorxiv for use of its open access interoperability.

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