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Impact of Chronic Warming on Soil Microbial Diversity

Chronic warming alters microbial traits and ecosystem functions in soil.

Kristen M. DeAngelis, M. S. Shinfuku

― 5 min read


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Table of Contents

Ecosystems are complex networks where plants, animals, and microorganisms interact. The role of microorganisms in these systems is significant because they help break down organic matter and recycle nutrients. One key aspect of how well an ecosystem works is based on the diversity of these microorganisms. However, measuring this diversity is not straightforward. Often, scientists look at the types of microorganisms present to infer their functions, but this method can be misleading, especially in environments like soil.

Functional Diversity, which focuses on the roles microorganisms play rather than their types, may provide a better view of how well an ecosystem functions. Despite this, measuring functional diversity in microorganisms can be tough due to their complexity and variation. A new framework called Yield, Acquisition, Stress (YAS) helps classify these microorganisms based on their life strategies. This method emphasizes how microorganisms deal with resources, stress, and competition in their environment.

Impact of Chronic Warming

Climate change has led to rising temperatures, which in turn affects Soil Health and the microorganisms living in it. Over time, warming can reduce organic matter in the soil and change how microorganisms behave. For instance, long-term warming can break down key compounds in the soil, like lignin, which is vital for the overall health of the ecosystem.

In experiments where soil is heated, it has been observed that the number of specific enzymes-proteins that help break down organic materials-increases. This change might be a response to the drier conditions created by warming, which makes it harder for microorganisms to access resources. Even though earlier studies showed no clear link between the diversity of microorganisms and how well the ecosystem functions, changes in soil quality and microbial behavior due to warming could influence this relationship.

Hypotheses

Based on these observations, we proposed two main ideas. First, we thought that the long-term effects of warming would improve the connection between functional diversity and ecosystem functioning because of increases in traits that help microorganisms acquire resources and cope with stress. Second, we believed that in heated soil plots, stress-related traits would show a stronger relationship with ecosystem functioning than in control plots that weren’t heated.

Study Site and Methods

Our study took place at the Harvard Forest warming experiment in Petersham, MA. Soil samples were collected from two different dates in 2014 after nearly 25 years of warming treatment. We divided the soil into different layers to analyze the organic matter and mineral contents separately.

To assess the overall functioning of the ecosystem, known as ecosystem multifunctionality (EMF), we looked at past data on enzyme activities and microbial biomass. EMF provides a way to understand how well the ecosystem performs various functions.

For functional diversity, we used existing data and a systematic method to analyze the microbial traits based on the YAS framework. This involved checking the quality of the data, removing unwanted sequences, and categorizing them according to their functions in the ecosystem. We also calculated different diversity metrics to understand the richness and evenness of the microbial traits in the samples.

Results

In the organic layer of soils that were heated, we found that the variety of traits related to resource acquisition was significantly lower than in the control soils. This decrease could indicate that chronic warming made the soil less hospitable for microorganisms that thrive in rich, organic environments. For example, specific traits linked to how microorganisms gather resources were less diverse, hinting at potential issues in carbon availability in these heated soils.

Interestingly, no differences were found in the diversity of traits in the mineral soils due to heating. Additionally, the seasonal changes did not appear to influence the diversity of microbial traits in either type of soil.

In the mineral soils, we noticed a complex relationship between EMF and the richness of acquisition-related traits affected by warming. In control soils, there was a positive trend, meaning that as the richness of these traits increased, the ecosystem functions seemed to improve. However, in heated plots, this relationship flipped, indicating a negative trend. This finding was contrary to our hypothesis and suggested that increased competition among microorganisms could hinder overall ecosystem function.

Acquisition traits are essential for resource competition, and higher competition can lead to less effective resource use. This situation often arises when diverse microorganisms cannot share resources well, resulting in less efficient functioning of the ecosystem. Stress can further complicate this competition by disrupting how microorganisms interact.

Discussion

Our study shows that warming significantly impacts the richness of traits related to resource acquisition in the organic layer of soil. The negative link between these traits and ecosystem functioning in heated plots highlights the complications that arise from increased competition among microorganisms. As heating affects the quality and quantity of available resources, the shift in microbial strategies may lead to less efficient functioning in the ecosystem.

These findings underline the fact that rising temperatures can limit the ability of microorganisms to thrive, thus impacting the overall health and functionality of ecosystems. While we expected long-term warming to enhance the relationship between functional diversity and ecosystem functioning, the results pointed out complexities and challenges that arise in heated environments.

Conclusion

Overall, our research indicates that long-term warming has detrimental effects on the diversity of important microbial traits in the soil. This shift can lead to negative consequences for how well the ecosystem performs its various functions. The connection between microbial diversity and ecosystem functioning is affected by the specific life strategies of microorganisms, which are influenced by environmental changes. As climate change continues to unfold, understanding these dynamics will be crucial for maintaining healthy ecosystems and mitigating the impacts of rising temperatures.

Original Source

Title: Long-term warming inverts the relationship between ecosystem function and microbial resource acquisition

Abstract: Soil microbial traits drive ecosystem functions, which can explain the positive correlation between microbial functional diversity and ecosystem function. However, microbial adaptation to climate change related warming stress can shift microbial traits with direct implications for soil carbon cycling. Here, we investigated how long-term warming affects the relationship between microbial trait diversity and ecosystem function. Soils were sampled after 24 years of +5{degrees}C warming alongside unheated control soils from the Harvard Forest Long-Term Ecological Research site. Ecosystem function was estimated from six different enzyme activities and microbial biomass. Functional diversity was calculated from metatranscriptomics sequencing, where reads were assigned to yield, acquisition, or stress trait categories. We found that in organic horizon soils, warming decreased the richness of acquisition-related traits. In the mineral soils, we observed that heated soils exhibited a negative relationship with the richness of acquisition-related traits. These results suggest that microbial communities exposed to long-term warming are shifting away from a resource acquisition life history strategy.

Authors: Kristen M. DeAngelis, M. S. Shinfuku

Last Update: 2024-10-26 00:00:00

Language: English

Source URL: https://www.biorxiv.org/content/10.1101/2024.10.23.619826

Source PDF: https://www.biorxiv.org/content/10.1101/2024.10.23.619826.full.pdf

Licence: https://creativecommons.org/licenses/by-nc/4.0/

Changes: This summary was created with assistance from AI and may have inaccuracies. For accurate information, please refer to the original source documents linked here.

Thank you to biorxiv for use of its open access interoperability.

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