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Tailocins: A New Hope Against Bacterial Infections

Tailocins offer a promising alternative to tackle rising antibiotic resistance.

Dorien Dams, Célia Pas, Agnieszka Latka, Zuzanna Drulis-Kawa, Lars Fieseler, Yves Briers

― 5 min read


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Bacterial infections are back to being a big problem for our health in this century. With bacteria spreading all over the globe and getting better at resisting antibiotics, scientists are feeling the heat to find new ways to treat these infections. One of the exciting new ideas is using something called phage tail-like bacteriocins, or tailocins for short.

What Are Tailocins?

Tailocins are unique protein packets that look a bit like viruses that infect bacteria (called bacteriophages), but they don’t have the ability to multiply. Imagine a giant protein complex in a suit but without a hat or a briefcase. They are like the cool kids in school who don’t need to replicate to make an impact!

When bacteria feel stressed, they produce these tailocins, which then go out to attack other competing bacteria in their community. This gives the producing bacteria an advantage. Tailocins come in two varieties: R-type and F-type.

R-type Tailocins

R-type tailocins have a design similar to a specific type of bacteriophage called T-even phage. They have a tubular part inside wrapped in a sheath. To kill a target bacteria, they latch on to it, cause some rearrangements in their structure, and then pierce the bacterium like a needle. This results in a nasty leak of ions that leads to the death of the bacteria.

F-type Tailocins

F-type tailocins are a bit different. They resemble another bacteriophage called lambda and have their own way of killing bacteria, but scientists aren't entirely sure how just yet. Some bacteria, like Pseudomonas aeruginosa, can make both types of tailocins, which is pretty impressive!

How Do Tailocins Work?

The way tailocins identify their target is through special proteins called Receptor-binding Proteins (RBPs). Think of these as the tailocin's GPS, guiding them to their bacterial targets. Each tailocin has its unique RBP that fits specific receptors found on the surface of certain bacteria. The great part? These RBPs are like customizable keys – they can be tweaked to fit different doors!

To make them better suited for specific bacteria, scientists are working on reshaping these RBPs. By mixing and matching different parts, they hope to create a whole range of tailocins that can target various bacterial strains effectively.

The Need for Variety

Using tailocins that target specific bacteria is becoming more appealing because they spare our good bacteria, helping keep our microbiome balanced. There’s a growing interest in developing a library of these specially tailored tailocins, but the challenge is that currently, tailocins are only found in a few bacteria species.

Engineering New RBPs

Thanks to advances in engineering technology, it’s now possible to adjust the host range of tailocins. By swapping out parts of the RBPs from different sources, scientists can create new combinations that may target a wider range of bacteria. The best-studied scaffold for this is the R2 tailocin from Pseudomonas aeruginosa.

The VersaTile Technique

This is where the VersaTile technique comes in, acting like a set of LEGO blocks for building these RBPs. It allows scientists to create a collection of different RBPs quickly, and assemble them in a one-step process. The flexibility of this method means it’s easier to create many new tailocins quickly.

Proving the Concept

As a test, researchers managed to take RBPs designed to target the O-antigen (a component found on the surface of certain bacteria) and graft them onto the R2 tailocin scaffold. They found that these Engineered tailocins could effectively attack bacteria with specific O-antigens, and even those that were previously untouched.

The Production Pipeline

The process involves creating a library of tiles composed of different components, assembling these as needed, and then producing the tailored tailocins in bacteria that are specially engineered for this task. The results from these tests are promising, indicating that the tailocin’s ability to target desired bacteria is possible.

Testing Effectiveness

In the lab, scientists have tested the effectiveness of both original and engineered tailocins. They did this through various methods, including survival assays to see how many bacteria were killed at different concentrations of the tailocin.

Results

They found that the native R2 tailocin was highly effective, able to kill at low concentrations, while engineered versions were sometimes less potent but still showed promise. This suggests that while tweaking these proteins can lead to interesting results, getting the engineering just right is crucial for maintaining or enhancing their effectiveness.

The Future of Tailocins

The research goes on to push the boundaries of what we can do with these tailocins. The goal is not just to create more of them but to make those that can effectively target a wide variety of harmful bacteria. With ongoing improvements and studies, these tailored-tailocin options could become a viable alternative to traditional antibiotics.

Beyond Bacteria

Interestingly, tailocins and RBPs have not just antibacterial properties. They can assist in diagnostics for identifying bacterial strains, offering a clever alternative to using antibiotics in some situations. Their precision may even make them better candidates for certain medical applications than traditional phages.

Tailocins vs Phages

It's important to note the differences between tailocins and phages. While phages multiply and can adapt over time, tailocins remain constant. This means they might be a more stable option when it comes to designing treatments.

The Bottom Line

In summary, the development of tailocins and the engineering of RBPs is an exciting field. While scientists are still working on perfecting these tools in the laboratory, the potential to combat bacterial infections without disrupting our healthy microbiome is a light at the end of a very dark tunnel. If there's anything we've learned from this journey, it's that bacterial resistance is here to stay, but so are the creative minds ready to tackle it. With tailocins leading the way, there’s hope for a future of healthier patients and fewer infections!

Original Source

Title: A VersaTile approach to reprogram the specificity of the R2-type tailocin towards different serotypes of Escherichia coli and Klebsiella pneumoniae

Abstract: Phage tail-like bacteriocins, or tailocins, provide a competitive advantage to producer cells by killing closely related bacteria. Morphologically similar to headless phages, their narrow target specificity is determined by receptor-binding proteins (RBPs). While RBP engineering has been used to alter the host range of a selected R2 tailocin from Pseudomonas aeruginosa, the process is labor-intensive, limiting broader application. We introduce a VersaTile-driven R2 tailocin engineering platform to scale up RBP grafting. This platform achieved three key milestones: (1) engineering R2 tailocins specific to Escherichia coli serogroups O26, O103, O104, O111, O145, O146 and O157; (2) reprogramming R2 tailocins to target for the first time capsule and a new species, specifically the capsular serotype K1 of E. coli and K11 and K63 of Klebsiella pneumoniae; (3) creating the first bivalent tailocin with a branched RBP and cross-species activity, effective against both E. coli K1 and K. pneumoniae K11. Over 90% of engineered tailocins were effective, with clear pathways for further optimization identified. ImportanceWhile tailocin engineering is a proven and promising concept, the current engineering approach lacks scalability, limiting a vast exploration. This study advances tailocin engineering by increasing its throughput. Implementing a scaled up approach, we have shown the flexibility of the R2 tailocin scaffold to accommodate diverse receptor-binding domains, expanding its functionality to target a new type of receptor (capsule) and a previously untargeted species. In addition, functional tailocins with branched receptor-binding proteins portraying dual, cross-genus activity were produced. This work lays the groundwork for a scalable platform for the development of engineered tailocins, marking an important step towards making R2 tailocins a practical therapeutic tool for targeted bacterial infections.

Authors: Dorien Dams, Célia Pas, Agnieszka Latka, Zuzanna Drulis-Kawa, Lars Fieseler, Yves Briers

Last Update: 2024-10-31 00:00:00

Language: English

Source URL: https://www.biorxiv.org/content/10.1101/2024.10.29.620980

Source PDF: https://www.biorxiv.org/content/10.1101/2024.10.29.620980.full.pdf

Licence: https://creativecommons.org/licenses/by-nc/4.0/

Changes: This summary was created with assistance from AI and may have inaccuracies. For accurate information, please refer to the original source documents linked here.

Thank you to biorxiv for use of its open access interoperability.

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