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NCS.1.x Antibodies: A New Hope Against Bird Flu

Research unveils promising NCS.1.x antibodies to combat avian influenza outbreaks.

Julia Lederhofer, Andrew J. Borst, Lam Nguyen, Rebecca A. Gillespie, Connor J. Williams, Emma L. Walker, Julie E. Raab, Christina Yap, Daniel Ellis, Adrian Creanga, Hyon-Xhi Tan, Thi H. T. Do, Michelle Ravichandran, Adrian B. McDermott, Valerie Le Sage, Sarah F. Andrews, Barney S. Graham, Adam K. Wheatley, Douglas S. Reed, Neil P. King, Masaru Kanekiyo

― 7 min read


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Table of Contents

Avian Influenza, often referred to as bird flu, is a viral infection that primarily affects birds but can also infect humans and other animals. Among the different types of avian influenza, the highly pathogenic avian influenza (HPAI) virus poses the most significant threat due to its potential to cause severe disease and high mortality rates. The H5N1 virus is a notable strain of HPAI, and it has been associated with outbreaks in both poultry and humans. The recurring outbreaks of this virus highlight the urgent need to prepare for potential pandemics.

The Importance of Pandemic Preparedness

The world is no stranger to pandemics, and the emergence of avian influenza is a reminder of the importance of being ready for such events. Health organizations and researchers are continuously on the lookout for effective ways to combat the threat posed by HPAI viruses. This includes identifying medical countermeasures, like vaccines and treatments, that can help protect against these viruses.

One of the strategies under investigation involves the use of broadly neutralizing Antibodies (bnAbs). Antibodies are proteins produced by the immune system that help fight off infections. In the case of flu, researchers aim to develop antibodies that can neutralize a wide range of influenza viruses, thus providing better protection.

The Challenge of Finding Effective Antibodies

In the pursuit of effective antibodies against avian influenza, researchers have focused on specific parts of the virus where antibodies can attach, called epitopes. The hemagglutinin (HA) protein on the virus's surface is one such target. Unfortunately, early attempts to create bnAbs that target HA showed varied results, with some antibodies being less effective than hoped.

One of these antibodies, known as VIR-2482, was particularly promising but failed to show the expected level of protection in a clinical trial. This setback encouraged scientists to consider other targets on the virus.

Discovering New Viral Targets

Another key protein found on the avian influenza virus is Neuraminidase (NA). This protein plays a crucial role in helping the virus spread from one cell to another. By inhibiting NA, researchers can potentially limit the virus's ability to replicate and cause disease.

Several NA inhibitors, including oseltamivir and zanamivir, have demonstrated effectiveness against different strains of influenza. These inhibitors work by blocking the NA protein, thereby preventing the virus from exiting infected cells. This has led researchers to explore the potential of antibodies that target the NA protein as a way to provide broad protection.

The Rise of Broadly Neutralizing Antibodies against Neuraminidase

Recent studies have identified monoclonal antibodies that can target the NA protein. These antibodies have been shown to possess good breadth of activity against multiple influenza strains. For example, a monoclonal antibody called 1G01 has been shown to effectively bind to the highly conserved catalytic site of NA.

These antibodies not only block the enzymatic activity of the virus but also demonstrate the ability to protect against various influenza strains in laboratory settings. Their broad reactivity means they could serve as valuable tools in the fight against both seasonal and pandemic influenza.

The Role of Computational Design in Antibody Development

One innovative approach to improving the discovery of antibodies has been the use of computational design. Researchers have created stabilized forms of the NA protein, referred to as stabilized neuraminidase proteins (sNAps). These sNAps maintain a stable structure that is representative of the virus, making them ideal for studying how antibodies interact with NA.

By using these sNAps, researchers can identify and characterize new antibodies that have the potential to provide protection against different strains of influenza. This has allowed them to identify a group of antibodies that target the NA protein effectively.

Characterizing New Antibodies

In a recent effort, researchers isolated a set of antibodies known as NCS.1.x that target group 1 subtype NA proteins. By analyzing these antibodies using advanced imaging techniques, they were able to understand how these antibodies bind to the NA protein.

Cryo-electron microscopy revealed that two of these antibodies, NCS.1 and NCS.1.1, bind to a conserved site in the NA protein. This binding involves a specific interaction facilitated by water molecules, which help stabilize the connections between the antibodies and the viral protein.

These interactions were found to mimic how the virus binds to its natural substrate, sialic acid. This mimicry is a clever trick that allows the antibodies to "fool" the virus and prevent it from functioning properly.

The Broad Reactivity of NCS.1.x Antibodies

The NCS.1.x antibodies showed remarkable breadth in their ability to recognize different NA proteins. They were not only effective against the N1 subtype but also demonstrated some reactivity to other subtypes like N2 and even influenza B strains. This broad reactivity suggests that these antibodies could be developed into effective treatments against a range of influenza viruses.

Testing Antibody Functionality in the Lab

Once researchers identified and characterized the NCS.1.x antibodies, they needed to assess how well these antibodies worked in laboratory settings. They conducted various tests to evaluate the ability of these antibodies to inhibit the activity of NA proteins.

One method used was the influenza replication inhibition NA-based assay (IRINA). This assay measures how well the antibodies block the activity of NA on the surface of infected cells. The NCS.1.x antibodies showed robust activity against H1N1 and H5N1 viruses, supporting the notion that they could serve as effective therapeutic agents.

In addition to IRINA, researchers utilized another assay called enzyme-linked lectin assay (ELLA) to further assess the antibodies' capabilities. This assay tests whether the antibodies can prevent NA from cleaving sialic acid from a sialylated glycoprotein. Again, the NCS.1.x antibodies performed well, demonstrating their potential for effective antiviral action.

In Vivo Testing of Antibodies in Mice

After showing promise in the lab, the next step was to evaluate the effectiveness of NCS.1.x antibodies in living organisms, specifically mice. Researchers administered the antibodies to mice before infecting them with various strains of influenza.

The results were encouraging. NCS.1.x antibodies provided excellent protection against H1N1, with mice showing minimal weight loss and survival rates comparable to positive control antibodies. In the case of influenza B and H5N1 strains, the NCS.1.x antibodies also conferred significant protection, illustrating their potential as therapeutic agents.

The Potential of NCS.1.x Antibodies in Combating H5N1 Outbreaks

Given the ongoing global concern regarding H5N1 outbreaks, the effectiveness of NCS.1.x antibodies against this strain is particularly noteworthy. Researchers tested these antibodies against recent H5N1 viruses from human cases and found that they provided effective inhibition and protection in laboratory settings.

This suggests that NCS.1.x antibodies could play a crucial role in controlling future H5N1 outbreaks and preventing the spread of highly pathogenic strains. The ability of these antibodies to act against such dangerous viruses could be a significant asset in the global health toolkit.

Implications for Future Influenza Treatment

The findings surrounding NCS.1.x antibodies and their potential applications have important implications for future treatments against influenza. Their broad reactivity and strong protective capabilities indicate that these antibodies could be developed into effective therapies for high-risk populations, particularly during outbreaks of severe strains of the virus.

The development of antibodies targeting both HA and NA proteins could offer a dual approach to influenza prevention. Such strategies may help mitigate the risks associated with rapid viral evolution and the emergence of resistant strains.

Conclusion

In summary, the ongoing research into avian influenza and the development of effective antibodies highlight the importance of being prepared for potential pandemics. The NCS.1.x antibodies, with their ability to target the NA protein effectively, represent a promising avenue for the prevention and treatment of influenza.

As researchers continue to explore and expand our understanding of these antibodies, the potential for effective vaccination and therapeutic strategies becomes increasingly clear. With ongoing vigilance and innovation, the global health community can work towards a future where the threats posed by influenza are better managed, keeping both people and poultry safe from harm.

And remember, folks, when it comes to viruses, prevention is always better than a cure. Just like avoiding that questionable buffet at an all-you-can-eat crab shack! Stay safe, stay healthy, and keep washing those hands!

Original Source

Title: Structural Convergence and Water-Mediated Substrate Mimicry Enable Broad Neuraminidase Inhibition by Human Antibodies

Abstract: Influenza has been responsible for multiple global pandemics and seasonal epidemics and claimed millions of lives. The imminent threat of a panzootic outbreak of avian influenza H5N1 virus underscores the urgent need for pandemic preparedness and effective countermeasures, including monoclonal antibodies (mAbs). Here, we characterize human mAbs that target the highly conserved catalytic site of viral neuraminidase (NA), termed NCS mAbs, and the molecular basis of their broad specificity. Cross-reactive NA-specific B cells were isolated by using stabilized NA probes of non-circulating subtypes. We found that NCS mAbs recognized multiple NAs of influenza A as well as influenza B NAs and conferred prophylactic protections in mice against H1N1, H5N1, and influenza B viruses. Cryo-electron microscopy structures of two NCS mAbs revealed that they rely on structural mimicry of sialic acid, the substrate of NA, by coordinating not only amino acid side chains but also water molecules, enabling inhibition of NA activity across multiple influenza A and B viruses, including avian influenza H5N1 clade 2.3.4.4b viruses. Our results provide a molecular basis for the broad reactivity and inhibitory activity of NCS mAbs targeting the catalytic site of NA through substrate mimicry.

Authors: Julia Lederhofer, Andrew J. Borst, Lam Nguyen, Rebecca A. Gillespie, Connor J. Williams, Emma L. Walker, Julie E. Raab, Christina Yap, Daniel Ellis, Adrian Creanga, Hyon-Xhi Tan, Thi H. T. Do, Michelle Ravichandran, Adrian B. McDermott, Valerie Le Sage, Sarah F. Andrews, Barney S. Graham, Adam K. Wheatley, Douglas S. Reed, Neil P. King, Masaru Kanekiyo

Last Update: 2024-12-03 00:00:00

Language: English

Source URL: https://www.biorxiv.org/content/10.1101/2024.11.27.625426

Source PDF: https://www.biorxiv.org/content/10.1101/2024.11.27.625426.full.pdf

Licence: https://creativecommons.org/publicdomain/zero/1.0/

Changes: This summary was created with assistance from AI and may have inaccuracies. For accurate information, please refer to the original source documents linked here.

Thank you to biorxiv for use of its open access interoperability.

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