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The Dual Nature of Amyloids: Helpers or Hindrances?

Amyloids can harm but also help in pigmentation processes.

Haruaki Yanagisawa, Harumi Arai, Hideyuki Miyazawa, Masahide Kikkawa, Toshiyuki Oda

― 8 min read


Amyloids: Friends or Amyloids: Friends or Foes? amyloids in health. Examining the double-edged role of
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Amyloids are collections of proteins that can build up in the body. While often thought of as troublemakers linked to diseases like Alzheimer’s, some amyloids actually do good things. They play important roles in normal bodily functions, such as helping certain cells to create color pigments.

One interesting example is a protein called PMEL. This protein is made in certain skin cells that produce pigment. PMEL can form amyloid fibers that help to organize the deposition of Melanin, the pigment that gives color to our skin, hair, and eyes. So, while amyloids have a bad reputation, they can also be team players in the body.

The Maturation of PMEL Amyloids

PMEL goes through a series of steps as it matures. This process happens inside specialized structures in cells called Melanosomes. These melanosomes have four stages: I, II, III, and IV. In stage II, PMEL starts forming fibrous structures essential for moving on to stage III, where melanin begins to pile up.

Despite the importance of these fibers, the exact shape and structure of PMEL amyloids have been tricky to figure out. Parts of the protein known as the core amyloid-forming (CAF) domain and the repeat (RPT) domain have been linked to amyloid formation, but the specific ways they contribute have not been fully understood.

There’s also some evidence that sugars attached to the RPT domain could change how the amyloid fibers are structured.

The G175S Mutation and Its Effects

In some cases, changes (or mutations) in the PMEL gene can lead to problems, like pigment dispersion syndrome (PDS). This is when colored granules get released into the eye, which can cause issues like increased pressure in the eye and even vision loss. About 15-20% of people with PDS end up with a serious condition called pigmentary glaucoma.

One specific mutation in PMEL is called Gly175Ser (or G175S for short). This change could mess with how PMEL forms amyloids. However, researchers are still trying to figure out exactly what this mutation does on a molecular level.

Discovering the Structures of PMEL Amyloids

Researchers recently managed to get a close look at PMEL amyloids, revealing two different shapes (or polymorphs) present in normal PMEL amyloids. They also found that the G175S mutation leads to structural changes in these amyloids. Essentially, this mutation causes a rush in the production of amyloids within melanosomes, shedding light on what goes wrong in PDS.

Techniques Used to Observe PMEL Amyloids

To study these amyloids, scientists gathered them from a specific cell type known as the HMV-II human melanoma cell line. They used advanced imaging methods, such as cryo-electron microscopy (cryo-EM), to visualize the structures. Through this process, they discovered thick and thin amyloid fibers, which represent different types of structures made by PMEL.

The researchers figured out that the thick fibers form a more organized structure that helps in melanin deposition. However, the thin fibers might be less stable and represent an early stage of PMEL amyloid formation.

Characteristics of Two Polymorphic Forms

The analysis of PMEL amyloids showed two distinct forms.

  1. Polymorph 1: This form has a two-start helical structure, meaning it twists in a unique way that helps build the amyloid's strength.
  2. Polymorph 2: This variation forms a one-start helix with some noticeable differences in its structure. An interesting feature of Polymorph 2 is that it has a central cavity, while Polymorph 1 does not. This cavity could be important for interactions with melanin or other substances inside the melanosome.

The Role of the CAF Domain

Further studies focused on a specific part of the PMEL protein known as the CAF domain, which is crucial for forming amyloid fibrils. Interestingly, while the researchers were able to replicate the structures of PMEL amyloids in the lab, they found that the G175S mutation caused significant changes in how these structures packed together.

In the G175S fibers, the first β-sheet was split into three smaller parts, affecting the overall shape and stability of the amyloid. There was also an extra bond formed between two amino acids in the G175S version of the protein, which might help hold the structure together better, despite the changes it introduced.

Investigating PMEL Amyloid Polymerization

To understand how PMEL amyloids form, the researchers set up experiments to test the CAF domain of both normal and G175S PMEL. They found that when they mixed the proteins in a lab setting, the G175S variant formed amyloid fibrils much faster than the normal version. This aligned with the observations of faster amyloid production inside cells.

Furthermore, in the laboratory tests, the G175S fibers turned out to be not only thicker but also more plentiful.

The Secretion of Amyloids from Cells

Building on their research, the scientists looked into how much amyloid was released by cells expressing either the normal or G175S PMEL. The G175S cells released around 70% more amyloid than normal PMEL cells. This might mean that the changes in structure caused by the G175S mutation result in more amyloid spilling out from the cells.

Interestingly, even with all these changes, the overall structure of the melanosomes—where the PMEL is produced—remained unchanged. It’s like the G175S mutation turbocharged the factory but didn’t change the factory itself.

Investigating Melanosome Structure

To check if the G175S mutation altered the physical appearance and arrangement of melanosomes, scientists used advanced imaging techniques. They examined melanosomes from cells expressing either normal or G175S PMEL and found no significant differences in size or overall structure.

This suggests that while the G175S mutation ramps up amyloid formation and leads to increased secretion, it does not mess with how melanosomes are built. It's as if the pizza oven gets hotter, but the pizza itself doesn’t change shape.

The Impact on Melanosome Maturation

The researchers also looked into whether the G175S mutation influenced how melanosomes develop through their stages. They measured how many melanosomes were in different stages of development and discovered that the G175S mutation resulted in more melanosomes reaching stage III—where melanin starts to accumulate—while stage II was less common.

In simple terms, the G175S mutation sped up the process for melanosomes to mature and get ready for melanin production.

Implications for Pigment Dispersion Syndrome (PDS)

The findings from this research have important implications for understanding PDS, which involves the release of pigment granules. The structural changes and faster amyloid formation associated with the G175S mutation may contribute to the excessive secretion of melanin granules into the eye, leading to issues like increased eye pressure and risk of glaucoma.

In short, the findings suggest that while PMEL amyloids are usually helpful for maintaining pigmentation, the G175S mutation can turn them into troublemakers.

Understanding the Function of Different PMEL Domains

While much of the research focused on the CAF domain, it’s important to remember that another section of PMEL—the RPT domain—plays a crucial role too. The RPT domain is known to be heavily modified by sugars, which may help stabilize the parts that contribute to melanin deposition.

However, because of the methods used to isolate the amyloids, the researchers could not determine how much the RPT domain added to the structure of the amyloids.

Challenges in Studying PMEL Amyloids

Studying PMEL amyloids is not without its struggles. Their tangled organization within melanosomes makes it difficult to isolate individual fibers for study. The research showed that the amyoids can arrange themselves into complex structures, indicating that analyzing them in their natural settings will need creative solutions.

Future Directions

This research lays the groundwork for learning more about PMEL and how certain mutations impact its function and structure. Future work could focus on examining other PMEL mutations, exploring how the RPT domain contributes to the overall structure of amyloids, and devising strategies to counteract the problems that arise from accelerated amyloid formation in PDS.

Final Thoughts

In conclusion, this study brought new clarity to the structural characteristics of PMEL amyloids and highlighted the significant impacts of the G175S mutation. While amyloids can be seen as villains in some diseases, this research showcases their role in pigmentation and underlines the complex relationship between protein structure, function, and disease.

And who knew that something as seemingly boring as a protein could be linked to both colorful pigmentation and serious eye conditions? Science truly is full of surprises!

Original Source

Title: Cryo-EM of PMEL Amyloids Reveals Pathogenic Mechanism of Pigment Dispersion Syndrome

Abstract: PMEL amyloids provide a vital scaffold for melanin deposition in melanosomes, playing a central role in pigmentation. Despite their importance, the high-resolution structure of PMEL amyloids has remained elusive. Here, we determined near-atomic resolution structures of wild-type PMEL amyloids using cryo-electron microscopy, revealing two distinct polymorphic forms with unique structural features. We further examined the pathogenic G175S mutation linked to pigment dispersion syndrome (PDS). Structural analysis showed that the G175S mutation introduces an additional hydrogen bond, stabilizing a novel fibril conformation. In vitro assays demonstrated a fourfold increase in polymerization efficiency for the G175S mutant compared to the wild-type. This enhanced polymerization correlated with a [~]70% increase in secreted amyloids in G175S-expressing cells without detectable changes in melanosome morphology or number. These findings suggest that the G175S mutation promotes amyloidogenesis within melanosomes, increasing amyloid load and contributing to PDS pathophysiology. This study provides insights into the molecular basis of PMEL amyloid formation in both physiological and pathological contexts, offering new perspectives on their structural diversity and dysregulation in pigmentation disorders.

Authors: Haruaki Yanagisawa, Harumi Arai, Hideyuki Miyazawa, Masahide Kikkawa, Toshiyuki Oda

Last Update: 2024-12-12 00:00:00

Language: English

Source URL: https://www.biorxiv.org/content/10.1101/2024.12.09.627633

Source PDF: https://www.biorxiv.org/content/10.1101/2024.12.09.627633.full.pdf

Licence: https://creativecommons.org/licenses/by/4.0/

Changes: This summary was created with assistance from AI and may have inaccuracies. For accurate information, please refer to the original source documents linked here.

Thank you to biorxiv for use of its open access interoperability.

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